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GYG1P2 glycogenin 1 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 647317, updated on 10-Oct-2023

Summary

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Official Symbol
GYG1P2provided by HGNC
Official Full Name
glycogenin 1 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:39710
See related
AllianceGenome:HGNC:39710
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
13q31.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (82823039..82824777)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (82055522..82057260)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (83397174..83398912)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370285 Neighboring gene MPRA-validated peak2090 silencer Neighboring gene MPRA-validated peak2091 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:83171783-83172396 Neighboring gene uncharacterized LOC124903242 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:83473788-83474433 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:83474434-83475078 Neighboring gene RNA, U6 small nuclear 67, pseudogene Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr13:84091305-84092504 Neighboring gene uncharacterized LOC105370286

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • glycogenin 1 pseudogene 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021231.2 

    Range
    101..1839
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    82823039..82824777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    82055522..82057260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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