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BASP1P1 BASP1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 646201, updated on 10-Oct-2023

Summary

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Official Symbol
BASP1P1provided by HGNC
Official Full Name
BASP1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:39418
See related
AllianceGenome:HGNC:39418
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
13q12.12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (22897030..22898181, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (22095900..22097050, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (23471169..23472320, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene inositol polyphosphate multikinase pseudogene 1 Neighboring gene Rieske (Fe-S) domain containing pseudogene 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:23433285-23434072 Neighboring gene long intergenic non-protein coding RNA 621 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7448 Neighboring gene uncharacterized LOC105370109 Neighboring gene NANOG hESC enhancer GRCh37_chr13:23460806-23461307 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:23489315-23490228 Neighboring gene NUS1 pseudogene 2 Neighboring gene collagen alpha-1(III) chain-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mutational screening of BASP1 and transcribed processed pseudogene TPPsig-BASP1 in patients with Möbius syndrome. Uzumcu A, et al. J Genet Genomics, 2009 Apr. PMID 19376485

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Other Names

  • brain abundant, membrane attached signal protein 1 pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033774.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL157931

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    22897030..22898181 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    22095900..22097050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases