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ADH5P4 ADH5 pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 642443, updated on 10-Oct-2023

Summary

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Official Symbol
ADH5P4provided by HGNC
Official Full Name
ADH5 pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:21377
See related
AllianceGenome:HGNC:21377
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ADH5B; RCADH5; bA707M13.2
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Genomic context

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Location:
6q12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (65835477..65838068, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (66987811..66990402, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (66545370..66547961, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene eyes shut homolog Neighboring gene uncharacterized LOC124901559 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92568 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92593 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92629 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92636 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92651 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92656 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92672 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92766 Neighboring gene Neanderthal introgressed variant-containing enhancers experimental_92772 and experimental_92778 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92831 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92928 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92954 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:66278733-66279372 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93128 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93152 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93271 Neighboring gene H3K4me1 hESC enhancers GRCh37_chr6:66348122-66348622 and GRCh37_chr6:66348623-66349123 Neighboring gene Neanderthal introgressed variant-containing enhancers experimental_93370 and experimental_93383 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93446 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93466 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93494 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93502 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93582 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:66481227-66481728 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:66481729-66482228 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93679 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93689 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93713 Neighboring gene SLC25A51 pseudogene 1 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93741 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93781 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93800 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93837 Neighboring gene NANOG hESC enhancer GRCh37_chr6:66681097-66681598 Neighboring gene uncharacterized LOC105377838 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93892 Neighboring gene uncharacterized LOC105377840 Neighboring gene uncharacterized LOC105377839

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. cDNA sequence of human class III alcohol dehydrogenase. Sharma CP, et al. Biochem Biophys Res Commun, 1989 Oct 31. PMID 2818582
  2. Emergence of young human genes after a burst of retroposition in primates. Marques AC, et al. PLoS Biol, 2005 Nov. PMID 16201836, Free PMC Article
  3. Investigation of genetic susceptibility factors for human longevity - a targeted nonsynonymous SNP study. Flachsbart F, et al. Mutat Res, 2010 Dec 10. PMID 20800603

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Observational study of gene-disease association. (HuGE Navigator)
    Title: Investigation of genetic susceptibility factors for human longevity - a targeted nonsynonymous SNP study.
Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • alcohol dehydrogenase 5 (class III), chi polypeptide, pseudogene 4
  • alcohol dehydrogenase 5B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_008303.2 

    Range
    101..2692
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    65835477..65838068 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187555.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    60664..63255 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    66987811..66990402 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases