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GPX1P1 glutathione peroxidase pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 441481, updated on 10-Oct-2023

Summary

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Official Symbol
GPX1P1provided by HGNC
Official Full Name
glutathione peroxidase pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:4560
See related
AllianceGenome:HGNC:4560
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GPXL1; GPXL2; GPXP1
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Genomic context

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Location:
Xp22.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (13378525..13379387, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (12959962..12960824, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (13396644..13397506, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene unknown transcript Neighboring gene ataxin 3 like Neighboring gene long intergenic non-protein coding RNA 1203 Neighboring gene uncharacterized LOC124905248 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20666 Neighboring gene NANOG hESC enhancer GRCh37_chrX:13432009-13432590 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:13446525-13447042 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29438 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29439 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29440 Neighboring gene ribosomal protein L30 pseudogene 15 Neighboring gene EGF like domain multiple 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A pseudogene for human glutathione peroxidase. Diamond AM, et al. Gene, 1992 Dec 15. PMID 1487153

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • glutathione peroxidase 1 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_012792.3 

    Range
    101..963
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    13378525..13379387 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    12959962..12960824 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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