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KRT18P16 keratin 18 pseudogene 16 [ Homo sapiens (human) ]

Gene ID: 391827, updated on 10-Oct-2023

Summary

Official Symbol
KRT18P16provided by HGNC
Official Full Name
keratin 18 pseudogene 16provided by HGNC
Primary source
HGNC:HGNC:33384
See related
Ensembl:ENSG00000235275 AllianceGenome:HGNC:33384
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

Location:
5q23.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (123636063..123637472)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (124152293..124153702)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (122971757..122973166)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23003 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23004 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16275 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16276 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23005 Neighboring gene high mobility group box 3 pseudogene 17 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:122861667-122861854 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23006 Neighboring gene casein kinase 1 gamma 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:122964549-122965050 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr5:123210028-123210778 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr5:123210779-123211528 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr5:123211529-123212279 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:123360854-123361427 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23007 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23008 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:123423241-123423991 Neighboring gene long intergenic non-protein coding RNA 1170 Neighboring gene uncharacterized LOC101927397 Neighboring gene high mobility group box 1 pseudogene 29

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009714.3 

    Range
    101..1510
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    123636063..123637472
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    124152293..124153702
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    GenBank, FASTA, Sequence Viewer (Graphics)