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MRPL45P1 mitochondrial ribosomal protein L45 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 359747, updated on 10-Oct-2023

Summary

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Official Symbol
MRPL45P1provided by HGNC
Official Full Name
mitochondrial ribosomal protein L45 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:29715
See related
AllianceGenome:HGNC:29715
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
2p11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (88364395..88365622, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (88376393..88377620, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (88663914..88665141, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124907855 Neighboring gene small nucleolar RNA U13 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr2:88629398-88629906 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:88630416-88630923 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:88649827-88650456 Neighboring gene Sharpr-MPRA regulatory region 3520 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:88651561-88651709 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:88652858-88653358 Neighboring gene NANOG hESC enhancer GRCh37_chr2:88654876-88655506 Neighboring gene RNA, U6 small nuclear 1168, pseudogene Neighboring gene RNA, U6 small nuclear 1007, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. Zhang Z, et al. Genomics, 2003 May. PMID 12706105

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002863.4 

    Range
    101..1328
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    88364395..88365622 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    88376393..88377620 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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