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HTN1 histatin 1 [ Homo sapiens (human) ]

Gene ID: 3346, updated on 5-Mar-2024

Summary

Official Symbol
HTN1provided by HGNC
Official Full Name
histatin 1provided by HGNC
Primary source
HGNC:HGNC:5283
See related
Ensembl:ENSG00000126550 MIM:142701; AllianceGenome:HGNC:5283
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HIS1; Hst1
Summary
This gene encodes a member of the histatin family of small, histidine-rich, cationic proteins. They function as antimicrobial peptides and are important components of the innate immune system. Histatins are found in saliva and exhibit antibacterial, antifungal activities and function in wound healing. [provided by RefSeq, Aug 2014]
Expression
Restricted expression toward salivary gland (RPKM 17545.5) See more
Orthologs
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Genomic context

Location:
4q13.3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (70050438..70058848)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (73385299..73393709)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (70916155..70924565)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene statherin Neighboring gene histatin 3 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:70928535-70929734 Neighboring gene casein alpha s2 like A, pseudogene Neighboring gene casein alpha s2 like B, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in endoplasmic reticulum IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular region NAS
Non-traceable Author Statement
more info
PubMed 
located_in extracellular region TAS
Traceable Author Statement
more info
 
is_active_in mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in mitochondrion IMP
Inferred from Mutant Phenotype
more info
PubMed 

General protein information

Preferred Names
histatin-1
Names
PPB
histidine-rich protein 1
post-PB protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001368990.1NP_001355919.1  histatin-1 isoform 2

    Status: REVIEWED

    Source sequence(s)
    AC063956
  2. NM_002159.4NP_002150.1  histatin-1 isoform 1 precursor

    See identical proteins and their annotated locations for NP_002150.1

    Status: REVIEWED

    Source sequence(s)
    AC063956
    Consensus CDS
    CCDS3534.1
    UniProtKB/Swiss-Prot
    P15515
    Related
    ENSP00000246896.3, ENST00000246896.8

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    70050438..70058848
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047450192.1XP_047306148.1  histatin-1 isoform X1

    UniProtKB/Swiss-Prot
    P15515
    Related
    ENSP00000424501.1, ENST00000511674.5

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_013171801.1 Reference GRCh38.p14 PATCHES

    Range
    90574..98984
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054331874.1XP_054187849.1  histatin-1 isoform X1

    UniProtKB/Swiss-Prot
    P15515

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    73385299..73393709
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054349913.1XP_054205888.1  histatin-1 isoform X1

    UniProtKB/Swiss-Prot
    P15515