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IGKV2OR2-10 immunoglobulin kappa variable 2/OR2-10 (pseudogene) [ Homo sapiens (human) ]

Gene ID: 28855, updated on 10-Oct-2023

Summary

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Official Symbol
IGKV2OR2-10provided by HGNC
Official Full Name
immunoglobulin kappa variable 2/OR2-10 (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:5806
See related
IMGT/GENE-DB:IGKV2/OR2-10; AllianceGenome:HGNC:5806
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
IGKV2OR210
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Genomic context

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See IGKV2OR2-10 in Genome Data Viewer
Location:
2q11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (97376255..97376973)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (97882888..97883606)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (97996726..97997444, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ubiquitin protein ligase E3A pseudogene 1 Neighboring gene immunoglobulin kappa variable 2/OR2-7 (pseudogene) Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:97987861-97988361 Neighboring gene immunoglobulin kappa variable 1/OR2-11 (pseudogene) Neighboring gene uncharacterized LOC107985920 Neighboring gene atherosclerotic plaque pathogenesis associated transcript

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of a group of transposed human V kappa genes. Zimmer FJ, et al. Biol Chem Hoppe Seyler, 1990 Mar. PMID 2111145

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • IGKV2/OR2-10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011661.2 

    Range
    101..819
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    97376255..97376973
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791765.1 Reference GRCh38.p14 PATCHES

    Range
    350953..351671
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    97882888..97883606
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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