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EIF1AXP1 EIF1AX pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 280661, updated on 10-Oct-2023

Summary

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Official Symbol
EIF1AXP1provided by HGNC
Official Full Name
EIF1AX pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:19900
See related
AllianceGenome:HGNC:19900
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
EIF1AP1
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Genomic context

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See EIF1AXP1 in Genome Data Viewer
Location:
1p36.13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (16683091..16686249, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (16398708..16401861, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (17009586..17012744, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene FAM231A/C-like protein LOC102723383 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 270 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 335 Neighboring gene tRNA-Gly (CCC) 4-1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:17019619-17020445 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:17020446-17021273 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr1:17021274-17022100 Neighboring gene espin pseudogene Neighboring gene uncharacterized LOC124903858 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:17027493-17028178 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:17034088-17034627 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:17034628-17035166 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:17043745-17044298 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:17044853-17045406 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:17045407-17045959 Neighboring gene tRNA-Val (CAC) 13-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The eIF1A solution structure reveals a large RNA-binding surface important for scanning function. Battiste JL, et al. Mol Cell, 2000 Jan. PMID 10678173
  2. Determination of the amino acid sequence of rabbit, human, and wheat germ protein synthesis factor eIF-4C by cloning and chemical sequencing. Dever TE, et al. J Biol Chem, 1994 Feb 4. PMID 8106356
  3. The DNA sequence of the human X chromosome. Ross MT, et al. Nature, 2005 Mar 17. PMID 15772651, Free PMC Article
  4. The DNA sequence and biological annotation of human chromosome 1. Gregory SG, et al. Nature, 2006 May 18. PMID 16710414
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • eukaryotic translation initiation factor 1A pseudogene 1
  • eukaryotic translation initiation factor 1A, X-linked pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002419.4 

    Range
    101..3259
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    16683091..16686249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791756.1 Reference GRCh38.p14 PATCHES

    Range
    850398..853555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    16398708..16401861 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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