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SNORD4A small nucleolar RNA, C/D box 4A [ Homo sapiens (human) ]

Gene ID: 26773, updated on 10-Oct-2023

Summary

Official Symbol
SNORD4Aprovided by HGNC
Official Full Name
small nucleolar RNA, C/D box 4Aprovided by HGNC
Primary source
HGNC:HGNC:10097
See related
Ensembl:ENSG00000238578 AllianceGenome:HGNC:10097
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Z17A; RNU101A; mgh18S-121
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Genomic context

Location:
17q11.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (28722582..28722653)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (29665389..29665460)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (27049600..27049671)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene RAB34, member RAS oncogene family Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8349 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:27045659-27046259 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:27046260-27046861 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11938 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11939 Neighboring gene ribosomal protein L23a Neighboring gene small nucleolar RNA, C/D box 42B Neighboring gene small nucleolar RNA, C/D box 42A Neighboring gene small nucleolar RNA, C/D box 4B

Genomic regions, transcripts, and products

General gene information

Other Names

  • RNA, U101A small nucleolar
  • U101A small nucleolar RNA
  • U101A snoRNA
  • Z17A small nucleolar RNA
  • Z17A snoRNA

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_000010.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AF001689
    Related
    ENST00000459174.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    28722582..28722653
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    29665389..29665460
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)