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CYP2F2P cytochrome P450 family 2 subfamily F member 2, pseudogene [ Homo sapiens (human) ]

Gene ID: 171427, updated on 10-Oct-2023

Summary

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Official Symbol
CYP2F2Pprovided by HGNC
Official Full Name
cytochrome P450 family 2 subfamily F member 2, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:18851
See related
AllianceGenome:HGNC:18851
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CYP2F1P
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Genomic context

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Location:
19q13.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (40818477..40826773, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (43639153..43647447, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (41324382..41332678, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene RAB4B-EGLN2 readthrough (NMD candidate) Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10649 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10650 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:41306857-41307531 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:41307710-41308450 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14668 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:41314255-41314754 Neighboring gene egl-9 family hypoxia inducible factor 2 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:41317625-41318515 Neighboring gene cytochrome P450 family 2 subfamily T member 1, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14669 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:41332287-41332788 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:41332789-41333288 Neighboring gene Sharpr-MPRA regulatory region 4763 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:41354211-41354710 Neighboring gene CYP2A6 5' regulatory region Neighboring gene cytochrome P450 family 2 subfamily A member 6 Neighboring gene cytochrome P450 family 2 subfamily A member 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic Variants in IL6R and ADAM19 are Associated with COPD Severity in a Mexican Mestizo Population. Pérez-Rubio G, et al. COPD, 2016 Oct. PMID 27078193
  2. Identification and cross-species comparisons of CYP2F subfamily genes in mammals. Chen N, et al. Mutat Res, 2002 Feb 20. PMID 11827709
  3. Organization, structure and evolution of the CYP2 gene cluster on human chromosome 19. Hoffman SM, et al. Pharmacogenetics, 2001 Nov. PMID 11692077
  4. Comparison of cytochrome P450 (CYP) genes from the mouse and human genomes, including nomenclature recommendations for genes, pseudogenes and alternative-splice variants. Nelson DR, et al. Pharmacogenetics, 2004 Jan. PMID 15128046

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. CYP2F2P rs25455771 is associated with a lower risk of COPD.
    Title: Genetic Variants in IL6R and ADAM19 are Associated with COPD Severity in a Mexican Mestizo Population.
Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • cytochrome P450, family 2, subfamily F, polypeptide 1 pseudogene
  • cytochrome P450, family 2, subfamily F, polypeptide 2, pseudogene
  • cytochrome P450, subfamily IIF, polypeptide 1 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_029339.2 

    Range
    101..8397
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    40818477..40826773 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    43639153..43647447 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_024183.1: Suppressed sequence

    Description
    NG_024183.1: This RefSeq was permanently suppressed because it was redundant with the annotation of GeneID: 171427 on NG_000008.7

  2. NG_027795.1: Suppressed sequence

    Description
    NG_027795.1: This RefSeq was permanently suppressed because it was redundant with the annotation of GeneID: 171427 on NG_000008.7
Nucleotide Protein
Heading Accession and Version

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