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GLRXP1 glutaredoxin pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 170522, updated on 10-Oct-2023

Summary

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Official Symbol
GLRXP1provided by HGNC
Official Full Name
glutaredoxin pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:16544
See related
AllianceGenome:HGNC:16544
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GLRXP; bA425M5.1
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Genomic context

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See GLRXP1 in Genome Data Viewer
Location:
20q11.23
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (37602353..37603249, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (39326448..39327344, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (36230755..36231651, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene peptidylprolyl isomerase A pseudogene 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:36196423-36196923 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17848 Neighboring gene long intergenic non-protein coding RNA 1746 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:36219641-36220140 Neighboring gene long intergenic non-protein coding RNA 489 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17849 Neighboring gene ReSE screen-validated silencer GRCh37_chr20:36280377-36280529 Neighboring gene uncharacterized LOC100287792

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of the first human glutaredoxin pseudogene localized to human chromosome 20q11.2. Miranda-Vizuete A, et al. DNA Seq, 2001. PMID 11696981
  2. Cloning, sequencing, and characterization of alternatively spliced glutaredoxin 1 cDNA and its genomic gene: chromosomal localization, mrna stability, and origin of pseudogenes. Park JB, et al. J Biol Chem, 2005 Mar 18. PMID 15637068
  3. A genome-wide survey of human thioredoxin and glutaredoxin family pseudogenes. Spyrou G, et al. Hum Genet, 2001 Oct. PMID 11702225

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • glutaredoxin (thioltransferase) pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001013.5 

    Range
    101..997
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    37602353..37603249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    39326448..39327344 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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