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AMOT angiomotin [ Homo sapiens (human) ]

Gene ID: 154796, updated on 7-Apr-2024

Summary

Official Symbol
AMOTprovided by HGNC
Official Full Name
angiomotinprovided by HGNC
Primary source
HGNC:HGNC:17810
See related
Ensembl:ENSG00000126016 MIM:300410; AllianceGenome:HGNC:17810
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This gene belongs to the motin family of angiostatin binding proteins characterized by conserved coiled-coil domains and C-terminal PDZ binding motifs. The encoded protein is expressed predominantly in endothelial cells of capillaries as well as larger vessels of the placenta where it may mediate the inhibitory effect of angiostatin on tube formation and the migration of endothelial cells toward growth factors during the formation of new blood vessels. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]
Expression
Broad expression in placenta (RPKM 13.4), brain (RPKM 9.3) and 21 other tissues See more
Orthologs
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Genomic context

Location:
Xq23
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (112774877..112840831, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (111226753..111292678, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (112018105..112084059, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29862 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29863 Neighboring gene LHFPL tetraspan subfamily member 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:111911869-111912514 Neighboring gene high mobility group box 3 pseudogene 30 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:111981774-111982356 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:112022621-112023121 Neighboring gene microRNA 4329 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20945 Neighboring gene uncharacterized LOC107985651 Neighboring gene NANOG hESC enhancer GRCh37_chrX:112094284-112095066 Neighboring gene RNA, 7SL, cytoplasmic 266, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

HIV-1 interactions

Replication interactions

Interaction Pubs
Knockdown of angiomotin (AMOT) by shRNA library screening inhibits HIV-1 replication in cultured Jurkat T-cells PubMed
Knockdown of Angiomotin (AMOT) by siRNA inhibits HIV-1 release and infectivity, but expression of AMOT-like protein 1 and AMOT-like protein 2 can rescue HIV-1 Gag release PubMed

Protein interactions

Protein Gene Interaction Pubs
Pr55(Gag) gag Angiomotin (AMOT) depletion inhibits HIV-1 Gag release from cells, but expression of AMOT-like protein 1 and AMOT-like protein 2 can rescue HIV-1 Gag release PubMed
gag Angiomotin (AMOT) stimulates NEDD4L-dependent release of HIV-1 Gag delta PTAP/YP in a does-dependent manner from 293T, HeLa, and Jurkat cells PubMed
gag Angiomotin (AMOT), AMOT-like protein 1, and AMOT-like protein 2 bind directly and specifically to NEDD4L and HIV-1 Gag-delta p6 in protein pull-down experiments PubMed

Go to the HIV-1, Human Interaction Database

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • KIAA1071

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables angiostatin binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables signaling receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables signaling receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in actin cytoskeleton organization TAS
Traceable Author Statement
more info
PubMed 
involved_in angiogenesis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in blood vessel endothelial cell migration IEA
Inferred from Electronic Annotation
more info
 
involved_in cell migration involved in gastrulation IEA
Inferred from Electronic Annotation
more info
 
involved_in chemotaxis IEA
Inferred from Electronic Annotation
more info
 
involved_in establishment of cell polarity involved in ameboidal cell migration IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in establishment of epithelial cell polarity IEA
Inferred from Electronic Annotation
more info
 
involved_in gastrulation with mouth forming second IEA
Inferred from Electronic Annotation
more info
 
involved_in hippo signaling IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within hippo signaling IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in in utero embryonic development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within negative regulation of angiogenesis IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 
involved_in protein localization IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of cell migration IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within regulation of cell migration IDA
Inferred from Direct Assay
more info
PubMed 
involved_in regulation of small GTPase mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 
involved_in vasculogenesis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of COP9 signalosome IDA
Inferred from Direct Assay
more info
PubMed 
located_in actin filament IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in bicellular tight junction IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cell junction IDA
Inferred from Direct Assay
more info
 
is_active_in cytoplasmic vesicle IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol TAS
Traceable Author Statement
more info
 
located_in endocytic vesicle IDA
Inferred from Direct Assay
more info
PubMed 
located_in external side of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in lamellipodium IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in lamellipodium IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleoplasm IDA
Inferred from Direct Assay
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in ruffle IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_012628.1 RefSeqGene

    Range
    4985..70939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001113490.2NP_001106962.1  angiomotin isoform 1

    See identical proteins and their annotated locations for NP_001106962.1

    Status: REVIEWED

    Source sequence(s)
    AC004827
    Consensus CDS
    CCDS48154.1
    UniProtKB/Swiss-Prot
    Q4VCS5, Q504X5, Q9HD27, Q9UPT1
    Related
    ENSP00000361027.3, ENST00000371959.9
    Conserved Domains (3) summary
    COG1196
    Location:431676
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    PRK10263
    Location:191328
    PRK10263; DNA translocase FtsK; Provisional
    pfam12240
    Location:599806
    Angiomotin_C; Angiomotin C terminal
  2. NM_001386998.1NP_001373927.1  angiomotin isoform 1

    Status: REVIEWED

    Source sequence(s)
    AC004827
    Consensus CDS
    CCDS48154.1
    UniProtKB/Swiss-Prot
    Q4VCS5, Q504X5, Q9HD27, Q9UPT1
    Conserved Domains (3) summary
    COG1196
    Location:431676
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    PRK10263
    Location:191328
    PRK10263; DNA translocase FtsK; Provisional
    pfam12240
    Location:599806
    Angiomotin_C; Angiomotin C terminal
  3. NM_001386999.1NP_001373928.1  angiomotin isoform 1

    Status: REVIEWED

    Source sequence(s)
    AC004827
    Consensus CDS
    CCDS48154.1
    UniProtKB/Swiss-Prot
    Q4VCS5, Q504X5, Q9HD27, Q9UPT1
    Conserved Domains (3) summary
    COG1196
    Location:431676
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    PRK10263
    Location:191328
    PRK10263; DNA translocase FtsK; Provisional
    pfam12240
    Location:599806
    Angiomotin_C; Angiomotin C terminal
  4. NM_133265.5NP_573572.1  angiomotin isoform 2

    See identical proteins and their annotated locations for NP_573572.1

    Status: REVIEWED

    Source sequence(s)
    AC004827
    Consensus CDS
    CCDS14563.1
    UniProtKB/TrEMBL
    A2BDD9
    Related
    ENSP00000305557.1, ENST00000304758.5
    Conserved Domains (1) summary
    pfam12240
    Location:190393
    Angiomotin_C; Angiomotin C terminal

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    112774877..112840831 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047441856.1XP_047297812.1  angiomotin isoform X1

    UniProtKB/Swiss-Prot
    Q4VCS5, Q504X5, Q9HD27, Q9UPT1
  2. XM_047441857.1XP_047297813.1  angiomotin isoform X1

    UniProtKB/Swiss-Prot
    Q4VCS5, Q504X5, Q9HD27, Q9UPT1
  3. XM_005262090.1XP_005262147.1  angiomotin isoform X2

    See identical proteins and their annotated locations for XP_005262147.1

    UniProtKB/TrEMBL
    A2BDD9
    Conserved Domains (1) summary
    pfam12240
    Location:190393
    Angiomotin_C; Angiomotin C terminal

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    111226753..111292678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)