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LOC124901449 uncharacterized LOC124901449 [ Homo sapiens (human) ]

Gene ID: 124901449, updated on 10-Oct-2023

Summary

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Gene symbol
LOC124901449
Gene description
uncharacterized LOC124901449
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC124901449 in Genome Data Viewer
Location:
6q25.3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (159107012..159116259)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (160352534..160361859)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene radial spoke head 3 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:159419977-159420948 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:159420949-159421920 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25380 Neighboring gene TAGAP antisense RNA 1 Neighboring gene MPRA-validated peak6278 silencer Neighboring gene MPRA-validated peak6279 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25381 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25382 Neighboring gene MPRA-validated peak6280 silencer Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:159461684-159462883 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25383 Neighboring gene uncharacterized LOC112267968 Neighboring gene T cell activation RhoGTPase activating protein Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25384 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25385 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17748 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25386 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:159538123-159538330 Neighboring gene VISTA enhancer hs2576 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17750 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:159591287-159591786 Neighboring gene Sharpr-MPRA regulatory region 9512 Neighboring gene FNDC1 antisense RNA 1 Neighboring gene fibronectin type III domain containing 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:159659176-159659360 Neighboring gene FNDC1 intronic transcript 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

General protein information

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Preferred Names
uncharacterized protein LOC124901449

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    159107012..159116259
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047419647.1 → XP_047275603.1  uncharacterized protein LOC124901449 isoform X2

  2. XM_047419646.1 → XP_047275602.1  uncharacterized protein LOC124901449 isoform X1

RNA

  1. XR_007059837.1 RNA Sequence

  2. XR_007059838.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    160352534..160361859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047444783.1 → XP_047300739.1  uncharacterized protein LOC124901449 isoform X2

  2. XM_047444782.1 → XP_047300738.1  uncharacterized protein LOC124901449 isoform X1

RNA

  1. XR_007077253.1 RNA Sequence

  2. XR_007077254.1 RNA Sequence

  3. XR_007077255.1 RNA Sequence

Nucleotide Protein
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