U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

jag2b jagged canonical Notch ligand 2b [ Cottoperca gobio ]

Gene ID: 115028986, updated on 17-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
jag2b
Gene description
jagged canonical Notch ligand 2b
See related
Ensembl:ENSCGOG00000009934
Gene type
protein coding
RefSeq status
MODEL
Organism
Cottoperca gobio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Bovichtidae; Cottoperca
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See jag2b in Genome Data Viewer
Location:
chromosome: 24
Exon count:
26
Annotation release Status Assembly Chr Location
100 current fCotGob3.1 (GCF_900634415.1) 24 NC_041378.1 (4030824..4074005, complement)

Chromosome 24 - NC_041378.1Genomic Context describing neighboring genes Neighboring gene estrogen receptor 2a Neighboring gene golgin subfamily A member 6-like protein 22 Neighboring gene nudix (nucleoside diphosphate linked moiety X)-type motif 14 Neighboring gene kinetochore scaffold 1 Neighboring gene kinetochore localized astrin (SPAG5) binding protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_041378.1 Chromosome 24 Reference fCotGob3.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment or maintenance of epithelial cell apical/basal polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of protein-containing complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: protein jagged-2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cottoperca gobio Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCotGob3.1

Genomic

  1. NC_041378.1 Reference fCotGob3.1

    Range
    4030824..4074005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029462963.1 → XP_029318823.1  LOW QUALITY PROTEIN: protein jagged-2-like

    UniProtKB/TrEMBL
    A0A6J2S6C2
    Related
    ENSCGOP00000023298.1, ENSCGOT00000025152.1
    Conserved Domains (5) summary
    smart00215
    Location:875 → 947
    VWC_out; von Willebrand factor (vWF) type C domain
    cd00054
    Location:639 → 674
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00008
    Location:758 → 788
    EGF; EGF-like domain
    pfam01414
    Location:174 → 236
    DSL; Delta serrate ligand
    pfam07657
    Location:28 → 102
    MNNL; N-terminus of Notch ligand
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases