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LINC02799 long intergenic non-protein coding RNA 2799 [ Homo sapiens (human) ]

Gene ID: 112268275, updated on 10-Oct-2023

Summary

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Official Symbol
LINC02799provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2799provided by HGNC
Primary source
HGNC:HGNC:54324
See related
AllianceGenome:HGNC:54324
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
1q21.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (143499283..143500528, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (142571395..142572655, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene dopamine receptor D5 pseudogene Neighboring gene lysine methyltransferase 2C pseudogene 3 Neighboring gene NKAIN1 pseudogene 1 Neighboring gene uncharacterized LOC101927452 Neighboring gene Sharpr-MPRA regulatory region 1883 duplicate 1 Neighboring gene uncharacterized LOC112268273 Neighboring gene tRNA-Gln (anticodon CTG) 11-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    143499283..143500528 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002958629.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    142571395..142572655 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007070624.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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