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RNU4-63P RNA, U4 small nuclear 63, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479587, updated on 10-Oct-2023

Summary

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Official Symbol
RNU4-63Pprovided by HGNC
Official Full Name
RNA, U4 small nuclear 63, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46999
See related
Ensembl:ENSG00000223245 AllianceGenome:HGNC:46999
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU4-63P in Genome Data Viewer
Location:
2p21
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (41871271..41871388)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (41876757..41876874)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (42098411..42098528)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene lactate dehydrogenase A pseudogene 3 Neighboring gene ribosomal protein S12 pseudogene 4 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11389 Neighboring gene long intergenic non-protein coding RNA 1913 Neighboring gene MPRA-validated peak3674 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15625 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11390 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:42157683-42158882 Neighboring gene long intergenic non-protein coding RNA 1914

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044700.1 

    Range
    101..218
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    41871271..41871388
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    41876757..41876874
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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