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LOC105375728 uncharacterized LOC105375728 [ Homo sapiens (human) ]

Gene ID: 105375728, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105375728
Gene description
uncharacterized LOC105375728
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
8q24.12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (119832879..119868913)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (120961742..120998054)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene RN7SK pseudogene 153 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27841 Neighboring gene TATA-box binding protein associated factor 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27842 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27843 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27844 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19483 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:120879869-120880370 Neighboring gene DNA replication and sister chromatid cohesion 1 Neighboring gene Sharpr-MPRA regulatory region 238 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:120886325-120886825 Neighboring gene RNA, 7SL, cytoplasmic 396, pseudogene Neighboring gene HNF1 motif-containing MPRA enhancer 57 Neighboring gene DEP domain containing MTOR interacting protein Neighboring gene RNA, 5S ribosomal pseudogene 277 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19484 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27848 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:120983071-120983251 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:121059845-121060704 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:121060705-121061564 Neighboring gene uncharacterized LOC105375730 Neighboring gene MPRA-validated peak7153 silencer

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    119832879..119868913
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007061078.1 RNA Sequence

  2. XR_928590.3 RNA Sequence

  3. XR_007061079.1 RNA Sequence

  4. XR_001745684.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    120961742..120998054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079383.1 RNA Sequence

  2. XR_007079386.1 RNA Sequence

  3. XR_007079384.1 RNA Sequence

  4. XR_007079385.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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