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LOC105372252 uncharacterized LOC105372252 [ Homo sapiens (human) ]

Gene ID: 105372252, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105372252
Gene description
uncharacterized LOC105372252
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
19p13.3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (5336495..5338066)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (5322985..5324679)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type S Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_51629 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9920 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9921 Neighboring gene ribosomal protein L32 pseudogene 34 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9922 Neighboring gene uncharacterized LOC105372253 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:5294563-5295180 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:5295181-5295797 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:5298210-5298710 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:5301231-5301731 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:5319701-5320202 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:5320203-5320702 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13800 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13801 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13802 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:5338211-5338884 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9923 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:5364893-5365392 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:5395257-5395803 Neighboring gene Sharpr-MPRA regulatory region 11104 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_51701 Neighboring gene ReSE screen-validated silencer GRCh37_chr19:5477057-5477274 Neighboring gene uncharacterized LOC124904622 Neighboring gene zinc and ring finger 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    5336495..5338066
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_936279.3 RNA Sequence

  2. XR_007067105.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    5322985..5324679
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007088845.1 RNA Sequence

  2. XR_007088846.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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