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LOC105370299 uncharacterized LOC105370299 [ Homo sapiens (human) ]

Gene ID: 105370299, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105370299
Gene description
uncharacterized LOC105370299
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
13q31.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (86402915..86414564, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (85605388..85617037, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903227 Neighboring gene DEAD-box helicase 6 pseudogene 2 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr13:87010205-87011035 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:87015457-87015956 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:87015957-87016956 Neighboring gene NANOG hESC enhancer GRCh37_chr13:87017515-87018053 Neighboring gene thioredoxin like 1 pseudogene 1 Neighboring gene uncharacterized LOC105370300 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:87492703-87493204 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:87493205-87493704 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:87533403-87534006 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:87534007-87534608 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:87534609-87535210 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:87535211-87535812

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    86402915..86414564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_931620.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    85605388..85617037 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007083620.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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