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TRUND-NNN7-1 tRNA-undetermined (NNN) 7-1 [ Homo sapiens (human) ]

Gene ID: 103482531, updated on 10-Oct-2023

Summary

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Official Symbol
TRUND-NNN7-1provided by HGNC
Official Full Name
tRNA-undetermined (NNN) 7-1provided by HGNC
Primary source
HGNC:HGNC:50819
See related
AllianceGenome:HGNC:50819
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
tRNA-Und-NNN-7-1
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Genomic context

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See TRUND-NNN7-1 in Genome Data Viewer
Location:
1q25.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (178708903..178708975)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (178063663..178063735)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (178678038..178678110)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371632 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2143 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2144 Neighboring gene RNA, 5S ribosomal pseudogene 69 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2145 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2146 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2147 Neighboring gene Sharpr-MPRA regulatory region 1317 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr1:178621695-178622894 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2148 Neighboring gene NANOG hESC enhancer GRCh37_chr1:178650996-178651556 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:178653106-178654305 Neighboring gene microRNA 4424 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:178694153-178694307 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:178694729-178695318 Neighboring gene RALGPS2 antisense RNA 1 Neighboring gene Ral GEF with PH domain and SH3 binding motif 2 Neighboring gene PTPN2 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • transfer RNA-undetermined (NNN) 7-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_034187.1 

    Range
    101..173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    178708903..178708975
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    178063663..178063735
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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