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RNU6-46P RNA, U6 small nuclear 46, pseudogene [ Homo sapiens (human) ]

Gene ID: 100873760, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-46Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 46, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:34290
See related
Ensembl:ENSG00000206587 AllianceGenome:HGNC:34290
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RNU6-46
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Genomic context

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Location:
11q13.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (67895631..67895736)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (67899251..67899356)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (67663102..67663207)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 7 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:67593458-67593966 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:67593967-67594475 Neighboring gene NANOG hESC enhancer GRCh37_chr11:67610458-67611043 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr11:67624072-67624744 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:67640251-67640752 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:67640753-67641252 Neighboring gene long intergenic non-protein coding RNA 2754 Neighboring gene small nuclear ribonucleoprotein polypeptide C pseudogene 12 Neighboring gene RPS3A pseudogene 40

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043165.2 

    Range
    101..206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    67895631..67895736
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    67899251..67899356
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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