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SNX18P7 sorting nexin 18 pseudogene 7 [ Homo sapiens (human) ]

Gene ID: 100418980, updated on 10-Oct-2023

Summary

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Official Symbol
SNX18P7provided by HGNC
Official Full Name
sorting nexin 18 pseudogene 7provided by HGNC
Primary source
HGNC:HGNC:39615
See related
AllianceGenome:HGNC:39615
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
9p13.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (33575502..33577014)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (33594026..33595538)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (33575500..33577012)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 47 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28298 Neighboring gene ankyrin repeat domain 18B Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28299 Neighboring gene MPRA-validated peak7218 silencer Neighboring gene melanoma antigen pseudogene Neighboring gene cytochrome P450 family 4 subfamily F member 26, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:33586601-33587218 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:33600012-33600952 Neighboring gene PRSS3 pseudogene 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_023890.1 

    Range
    101..1613
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    33575502..33577014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    33594026..33595538
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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