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MIR103B1 microRNA 103b-1 [ Homo sapiens (human) ]

Gene ID: 100302238, updated on 10-Oct-2023

Summary

Official Symbol
MIR103B1provided by HGNC
Official Full Name
microRNA 103b-1provided by HGNC
Primary source
HGNC:HGNC:35384
See related
Ensembl:ENSG00000283612 miRBase:MI0007261; AllianceGenome:HGNC:35384
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MIR103-1AS; MIRN103-1AS; hsa-mir-103-1-as
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

Location:
5q34
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (168560904..168560965)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (169095686..169095747)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (167987909..167987970)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:167956617-167957158 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_83672 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:167962977-167963477 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:168006261-168006804 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23591 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16599 Neighboring gene solute carrier family 2 member 3 pseudogene 1 Neighboring gene NANOG hESC enhancer GRCh37_chr5:168027313-168027855 Neighboring gene microRNA 103a-1 Neighboring gene fibrillarin like 1 Neighboring gene pantothenate kinase 3 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:168064510-168065010 Neighboring gene ribosomal protein L10 pseudogene 9 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:168098339-168098914 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:168110883-168111382 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr5:168139117-168140316 Neighboring gene slit guidance ligand 3 Neighboring gene SLIT3 antisense RNA 2

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • hsa-mir-103b-1
  • microRNA 103-1-as

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables mRNA base-pairing translational repressor activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
part_of RISC complex IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_031721.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC020894
    Related
    ENST00000636572.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    168560904..168560965
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    169095686..169095747
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)