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TRQ-CTG13-1 tRNA-Gln (anticodon CTG) 13-1 [ Homo sapiens (human) ]

Gene ID: 100189538, updated on 10-Oct-2023

Summary

Official Symbol
TRQ-CTG13-1provided by HGNC
Official Full Name
tRNA-Gln (anticodon CTG) 13-1provided by HGNC
Primary source
HGNC:HGNC:35115
See related
AllianceGenome:HGNC:35115
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAQ53P
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Genomic context

Location:
5q33.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (151868513..151868584, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (152407508..152407579, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (151248074..151248145, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100652758 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16528 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16529 Neighboring gene G3BP stress granule assembly factor 1 Neighboring gene Sharpr-MPRA regulatory region 2380 Neighboring gene glycine receptor alpha 1 Neighboring gene glutamate-ammonia ligase pseudogene 1 Neighboring gene RNA, 5S ribosomal pseudogene 198 Neighboring gene Sharpr-MPRA regulatory region 1877 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:151297277-151297997 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:151304692-151304904 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr5:151326719-151327918 Neighboring gene long intergenic non-protein coding RNA 1933 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr5:151431291-151431938 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr5:151431939-151432585 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:151450292-151450532 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:151456754-151457342 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:151503900-151504459 Neighboring gene MPRA-validated peak5547 silencer

Genomic regions, transcripts, and products

General gene information

Other Names

  • tRNA-Gln-CTG-13-1
  • transfer RNA glutamine 53 (anticodon CUG) pseudogene
  • transfer RNA-Gln (CTG) 13-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_008596.1 

    Range
    101..172
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    151868513..151868584 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    152407508..152407579 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)