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TRG-TCC6-1 tRNA-Gly (anticodon TCC) 6-1 [ Homo sapiens (human) ]

Gene ID: 100189511, updated on 7-Apr-2024

Summary

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Official Symbol
TRG-TCC6-1provided by HGNC
Official Full Name
tRNA-Gly (anticodon TCC) 6-1provided by HGNC
Primary source
HGNC:HGNC:35086
See related
AllianceGenome:HGNC:35086
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAG35P
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Genomic context

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Location:
18q21.31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (57678945..57679016)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (55346177..55346248)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:55297311-55297811 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:55300102-55300950 Neighboring gene ATP8B1 antisense RNA 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:55310728-55311239 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:55311240-55311750 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13377 Neighboring gene ATPase phospholipid transporting 8B1 Neighboring gene tRNA-Gly (anticodon TCC) 5-1 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr18:55360919-55362118 Neighboring gene MPRA-validated peak3164 silencer Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:55366253-55366936 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:55380387-55380889 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:55386192-55386760 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:55386761-55387329 Neighboring gene uncharacterized LOC105372141 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:55404555-55405056 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:55405057-55405556 Neighboring gene RNA, U6 small nuclear 742, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • tRNA-Gly-TCC-6-1
  • transfer RNA glycine 35 (anticodon UCC) pseudogene
  • transfer RNA-Gly (TCC) 6-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_008569.1 

    Range
    101..172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    57678945..57679016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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