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TRQ-TTG9-1 tRNA-Gln (anticodon TTG) 9-1 [ Homo sapiens (human) ]

Gene ID: 100189509, updated on 10-Oct-2023

Summary

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Official Symbol
TRQ-TTG9-1provided by HGNC
Official Full Name
tRNA-Gln (anticodon TTG) 9-1provided by HGNC
Primary source
HGNC:HGNC:35084
See related
AllianceGenome:HGNC:35084
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAQ46P
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Genomic context

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Location:
12q23.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (97096913..97096986, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (97070288..97070361, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (97490691..97490764, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4747 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6836 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6837 Neighboring gene NEDD1 gamma-tubulin ring complex targeting factor Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4748 Neighboring gene uncharacterized LOC124902992 Neighboring gene uncharacterized LOC124902993 Neighboring gene VISTA enhancer hs1341 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr12:97524650-97525626 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr12:97525627-97526601 Neighboring gene uncharacterized LOC105369928 Neighboring gene uncharacterized LOC105369927 Neighboring gene uncharacterized LOC101928912 Neighboring gene NANOG hESC enhancer GRCh37_chr12:97628866-97629367

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Gln-TTG-9-1
  • transfer RNA glutamine 46 (anticodon UUG) pseudogene
  • transfer RNA-Gln (TTG) 9-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_008567.1 

    Range
    101..174
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    97096913..97096986 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    97070288..97070361 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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