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TRE-CTC14-1 tRNA-Glu (CTC) 14-1 [ Homo sapiens (human) ]

Gene ID: 100189450, updated on 10-Oct-2023

Summary

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Official Symbol
TRE-CTC14-1provided by HGNC
Official Full Name
tRNA-Glu (CTC) 14-1provided by HGNC
Primary source
HGNC:HGNC:35020
See related
AllianceGenome:HGNC:35020
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAE28P
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Genomic context

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See TRE-CTC14-1 in Genome Data Viewer
Location:
8q13.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (69160105..69160179)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (69588683..69588757)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (70072340..70072414)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_103615 Neighboring gene RNA, U7 small nuclear 102 pseudogene Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_103650 Neighboring gene TPM4 pseudogene 3 Neighboring gene NANOG hESC enhancer GRCh37_chr8:70120836-70121337 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:70192219-70192720 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:70245925-70246460 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:70246461-70246995 Neighboring gene uncharacterized LOC124901958 Neighboring gene Sharpr-MPRA regulatory region 8363 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:70281454-70281960 Neighboring gene long intergenic non-protein coding RNA 1603

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • transfer RNA glutamic acid 28 (anticodon CUC) pseudogene
  • transfer RNA-Glu (CTC) 14-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_008506.2 

    Range
    101..175
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    69160105..69160179
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    69588683..69588757
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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