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TRN-GTT2-6 tRNA-Asn (anticodon GTT) 2-6 [ Homo sapiens (human) ]

Gene ID: 100189195, updated on 10-Oct-2023

Summary

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Official Symbol
TRN-GTT2-6provided by HGNC
Official Full Name
tRNA-Asn (anticodon GTT) 2-6provided by HGNC
Primary source
HGNC:HGNC:34758
See related
AllianceGenome:HGNC:34758
Gene type
tRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TRNAN20
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Genomic context

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Location:
19p13.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (1383563..1383636)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (1353560..1353633)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (1383562..1383635)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:1354759-1355644 Neighboring gene PWWP domain containing 3A, DNA repair factor Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:1361729-1362399 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:1368468-1368968 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:1368969-1369469 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:1380436-1380936 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9704 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9705 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9706 Neighboring gene tRNA-Phe (anticodon GAA) 1-6 Neighboring gene NADH:ubiquinone oxidoreductase core subunit S7 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13611 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13612 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9707 Neighboring gene guanidinoacetate N-methyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • tRNA-Asn (GTT) 2-6
  • transfer RNA asparagine 20 (anticodon GUU)
  • transfer RNA-Asn (GTT) 2-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    1383563..1383636
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    1353560..1353633
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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