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SNAR-I small NF90 (ILF3) associated RNA I [ Homo sapiens (human) ]

Gene ID: 100170222, updated on 10-Oct-2023

Summary

Official Symbol
SNAR-Iprovided by HGNC
Official Full Name
small NF90 (ILF3) associated RNA Iprovided by HGNC
Primary source
HGNC:HGNC:34330
See related
AllianceGenome:HGNC:34330
Gene type
snRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
snaR-3
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Genomic context

Location:
3q28
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (190877930..190878050)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (193694258..193694378)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (190595719..190595839)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ENAH pseudogene 1 Neighboring gene geminin coiled-coil domain containing Neighboring gene ReSE screen-validated silencer GRCh37_chr3:190686471-190686660 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20987 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_66920 Neighboring gene uncharacterized LOC107986171 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr3:190875631-190876830 Neighboring gene NANOG hESC enhancer GRCh37_chr3:190909180-190909700 Neighboring gene OSTN antisense RNA 1 Neighboring gene osteocrin

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
GWAS of cerebrospinal fluid tau levels identifies risk variants for Alzheimer's disease.
EBI GWAS Catalog

General gene information

Other Names

  • small ILF3/NF90-associated RNA 3
  • small ILF3/NF90-associated RNA I

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024343.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC092952

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    190877930..190878050
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    193694258..193694378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)