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dbVar

Database of genomic structural variation

nsv6121402

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:copy number variation
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:305

Description:nsv5507998 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 124 SVs from 37 studies. See in: genome view

Remapped(Score: Perfect):29,148,473-29,148,777

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6121402	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000013.11	Chr13	29,148,473	29,148,777
nsv6121402	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000013.10	Chr13	29,722,610	29,722,914

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17962731	deletion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17962731	Remapped	Perfect	NC_000013.11:g.291 48473_29148777del	GRCh38.p12	First Pass	NC_000013.11	Chr13	29,148,473	29,148,777
nssv17962731	Submitted genomic		NC_000013.10:g.297 22610_29722914del	GRCh37 (hg19)		NC_000013.10	Chr13	29,722,610	29,722,914

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17962731	0.338	2162	6404

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