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dbVar

Database of genomic structural variation

nsv5947185

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:473

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 112 SVs from 27 studies. See in: genome view

Submitted genomic17,416,575-17,417,047

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5947185	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000020.11	Chr20	17,416,575	17,417,047
nsv5947185	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000020.10	Chr20	17,397,220	17,397,692

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17394133	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17394133	Submitted genomic		NC_000020.11:g.174 16575_17417047del	GRCh38 (hg38)		NC_000020.11	Chr20	17,416,575	17,417,047
nssv17394133	Remapped	Perfect	NC_000020.10:g.173 97220_17397692del	GRCh37.p13	First Pass	NC_000020.10	Chr20	17,397,220	17,397,692

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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