nsv5916113
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:4,340,545
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 13147 SVs from 138 studies. See in: genome view
Overlapping variant regions from other studies: 12446 SVs from 137 studies. See in: genome view
Overlapping variant regions from other studies: 5102 SVs from 76 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5916113 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000010.11 | Chr10 | 45,791,488 | 50,132,032 | ||
| nsv5916113 | Remapped | Pass | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 46,591,857 | 51,891,792 |
| nsv5916113 | Remapped | Pass | GRCh37.p13 | PATCHES | First Pass | NW_003871068.1 | Chr10|NW_0 03871068.1 | 62,603 | 2,281,126 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv17362031 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17362031 | Submitted genomic | NC_000010.11:g.457 91488_50132032del | GRCh38 (hg38) | NC_000010.11 | Chr10 | 45,791,488 | 50,132,032 | ||
| nssv17362031 | Remapped | Pass | NW_003871068.1:g.6 2603_2281126del | GRCh37.p13 | First Pass | NW_003871068.1 | Chr10|NW_0 03871068.1 | 62,603 | 2,281,126 |
| nssv17362031 | Remapped | Pass | NC_000010.10:g.465 91857_51891792del | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 46,591,857 | 51,891,792 |