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dbVar

Database of genomic structural variation

nsv5900453

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:135

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 128 SVs from 25 studies. See in: genome view

Submitted genomic179,695,343-179,695,477

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5900453	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	179,695,343	179,695,477
nsv5900453	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	179,122,344	179,122,478

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17424222	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17424222	Submitted genomic		NC_000005.10:g.179 695343_179695477de l	GRCh38 (hg38)		NC_000005.10	Chr5	179,695,343	179,695,477
nssv17424222	Remapped	Perfect	NC_000005.9:g.1791 22344_179122478del	GRCh37.p13	First Pass	NC_000005.9	Chr5	179,122,344	179,122,478

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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