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dbVar

Database of genomic structural variation

nsv5899321

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:84

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 101 SVs from 24 studies. See in: genome view

Submitted genomic33,796,398-33,796,481

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5899321	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000006.12	Chr6	33,796,398	33,796,481
nsv5899321	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000006.11	Chr6	33,764,175	33,764,258

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17432871	duplication	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17432871	Submitted genomic		NC_000006.12:g.337 96398_33796481dup	GRCh38 (hg38)		NC_000006.12	Chr6	33,796,398	33,796,481
nssv17432871	Remapped	Perfect	NC_000006.11:g.337 64175_33764258dup	GRCh37.p13	First Pass	NC_000006.11	Chr6	33,764,175	33,764,258

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17432871	0.001	1	1640

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