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dbVar

Database of genomic structural variation

nsv5898606

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:539

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 312 SVs from 47 studies. See in: genome view

Submitted genomic196,445,168-196,445,706

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5898606	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000003.12	Chr3	196,445,168	196,445,706
nsv5898606	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	196,172,039	196,172,577

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17416904	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17416904	Submitted genomic		NC_000003.12:g.196 445168_196445706de l	GRCh38 (hg38)		NC_000003.12	Chr3	196,445,168	196,445,706
nssv17416904	Remapped	Perfect	NC_000003.11:g.196 172039_196172577de l	GRCh37.p13	First Pass	NC_000003.11	Chr3	196,172,039	196,172,577

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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