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dbVar

Database of genomic structural variation

nsv5889175

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:60

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 110 SVs from 26 studies. See in: genome view

Submitted genomic159,977,808-159,977,867

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5889175	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000006.12	Chr6	159,977,808	159,977,867
nsv5889175	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000006.11	Chr6	160,398,840	160,398,899

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17418123	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17418123	Submitted genomic		NC_000006.12:g.159 977808_159977867de l	GRCh38 (hg38)		NC_000006.12	Chr6	159,977,808	159,977,867
nssv17418123	Remapped	Perfect	NC_000006.11:g.160 398840_160398899de l	GRCh37.p13	First Pass	NC_000006.11	Chr6	160,398,840	160,398,899

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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