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dbVar

Database of genomic structural variation

nsv5879943

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:84,566

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1934 SVs from 108 studies. See in: genome view

Submitted genomic196,761,730-196,846,295

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5879943	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	196,761,730	196,846,295
nsv5879943	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	196,730,860	196,815,425

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17354793	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17354793	Submitted genomic		NC_000001.11:g.196 761730_196846295de l	GRCh38 (hg38)		NC_000001.11	Chr1	196,761,730	196,846,295
nssv17354793	Remapped	Perfect	NC_000001.10:g.196 730860_196815425de l	GRCh37.p13	First Pass	NC_000001.10	Chr1	196,730,860	196,815,425

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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