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dbVar

Database of genomic structural variation

nsv5877972

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:10,952

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 580 SVs from 71 studies. See in: genome view

Submitted genomic42,517,452-42,528,403

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5877972	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000022.11	Chr22	42,517,452	42,528,403
nsv5877972	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000022.10	Chr22	42,913,458	42,924,409

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv17483576	copy number variation	Sequencing	Sequence alignment	0
nssv17483577	copy number variation	Sequencing	Sequence alignment	2
nssv17483578	copy number variation	Sequencing	Sequence alignment	3

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17483576	Submitted genomic		GRCh38 (hg38)		NC_000022.11	Chr22	42,517,452	42,528,403
nssv17483577	Submitted genomic		GRCh38 (hg38)		NC_000022.11	Chr22	42,517,452	42,528,403
nssv17483578	Submitted genomic		GRCh38 (hg38)		NC_000022.11	Chr22	42,517,452	42,528,403
nssv17483576	Remapped	Perfect	GRCh37.p13	First Pass	NC_000022.10	Chr22	42,913,458	42,924,409
nssv17483577	Remapped	Perfect	GRCh37.p13	First Pass	NC_000022.10	Chr22	42,913,458	42,924,409
nssv17483578	Remapped	Perfect	GRCh37.p13	First Pass	NC_000022.10	Chr22	42,913,458	42,924,409

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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