nsv5654178
- Organism: Homo sapiens
- Study:nstd207 (Ebert et al. 2021)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Ebert et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 146 SVs from 34 studies. See in: genome view
Overlapping variant regions from other studies: 146 SVs from 34 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5654178 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000015.10 | Chr15 | 50,340,887 | 50,340,887 | ||
| nsv5654178 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 50,633,084 | 50,633,084 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv17086639 | insertion | HG03683 | Sequencing | Sequence alignment | 2,232 |
| nssv17098403 | insertion | SAMN00001694 | Sequencing | Sequence alignment | 8,610 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17086639 | Submitted genomic | NC_000015.10:g.503 40887_50340888ins5 2 | GRCh38 (hg38) | NC_000015.10 | Chr15 | 50,340,887 | 50,340,887 | ||
| nssv17098403 | Submitted genomic | NC_000015.10:g.503 40887_50340888ins1 10 | GRCh38 (hg38) | NC_000015.10 | Chr15 | 50,340,887 | 50,340,887 | ||
| nssv17086639 | Remapped | Perfect | NC_000015.9:g.5063 3084_50633085ins52 | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 50,633,084 | 50,633,084 |
| nssv17098403 | Remapped | Perfect | NC_000015.9:g.5063 3084_50633085ins11 0 | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 50,633,084 | 50,633,084 |