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dbVar

Database of genomic structural variation

nsv5600004

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:275

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 127 SVs from 27 studies. See in: genome view

Submitted genomic86,879,584-86,879,858

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5600004	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000011.10	Chr11	86,879,584	86,879,858
nsv5600004	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	86,590,626	86,590,900

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17076117	deletion	SAMN00801888	Sequencing	Sequence alignment	2,004

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17076117	Submitted genomic		NC_000011.10:g.868 79584_86879858delA	GRCh38 (hg38)		NC_000011.10	Chr11	86,879,584	86,879,858
nssv17076117	Remapped	Perfect	NC_000011.9:g.8659 0626_86590900delA	GRCh37.p13	First Pass	NC_000011.9	Chr11	86,590,626	86,590,900

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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