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dbVar

Database of genomic structural variation

nsv5589774

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:8,981

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 174 SVs from 35 studies. See in: genome view

Submitted genomic13,712,460-13,721,440

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5589774	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000012.12	Chr12	13,712,460	13,721,440
nsv5589774	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000012.11	Chr12	13,865,394	13,874,374

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17078971	deletion	HG01505	Sequencing	Sequence alignment	1,109

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17078971	Submitted genomic		NC_000012.12:g.137 12460_13721440delA	GRCh38 (hg38)		NC_000012.12	Chr12	13,712,460	13,721,440
nssv17078971	Remapped	Perfect	NC_000012.11:g.138 65394_13874374delA	GRCh37.p13	First Pass	NC_000012.11	Chr12	13,865,394	13,874,374

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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