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dbVar

Database of genomic structural variation

nsv4893823

Organism: Homo sapiens

Study:nstd200 (Abel et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:9,225

Publication(s):Abel et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 446 SVs from 28 studies. See in: genome view

Submitted genomic100,901,929-100,911,155

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4893823	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000023.11	ChrX	100,901,930 (-1, +3)	100,911,154 (-3, +1)
nsv4893823	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000023.10	ChrX	100,156,919 (-1, +3)	100,166,143 (-3, +1)

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16589509	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16589509	Submitted genomic		NC_000023.11:g.(10 0901929_100901933) _(100911151_100911 155)del	GRCh38 (hg38)		NC_000023.11	ChrX	100,901,930 (-1, +3)	100,911,154 (-3, +1)
nssv16589509	Remapped	Perfect	NC_000023.10:g.(10 0156918_100156922) _(100166140_100166 144)del	GRCh37.p13	First Pass	NC_000023.10	ChrX	100,156,919 (-1, +3)	100,166,143 (-3, +1)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16589509	<0.001	2	29246

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