nsv4674911
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:2,667,658
- Description:GRCh37/hg19 6q21(chr6:109564694-112232351)x1 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 6157 SVs from 107 studies. See in: genome view
Overlapping variant regions from other studies: 6158 SVs from 107 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4674911 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 109,243,491 | 111,911,148 |
| nsv4674911 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000006.11 | Chr6 | 109,564,694 | 112,232,351 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16208745 | copy number loss | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV001007557.1, VCV000816620.1 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16208745 | Remapped | Perfect | NC_000006.12:g.(?_ 109243491)_(111911 148_?)del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 109,243,491 | 111,911,148 |
| nssv16208745 | Submitted genomic | NC_000006.11:g.(?_ 109564694)_(112232 351_?)del | GRCh37 (hg19) | NC_000006.11 | Chr6 | 109,564,694 | 112,232,351 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16208745 | GRCh37: NC_000006.11:g.(?_109564694)_(112232351_?)del | copy number loss | germline | not provided | Uncertain significance | ClinVar | RCV001007557.1, VCV000816620.1 | 1 |