nsv4451868
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:15,610,741
- Description:GRCh37/hg19 Xq13.3-21.31(chrX:74667077-90312981)x1 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 21779 SVs from 100 studies. See in: genome view
Overlapping variant regions from other studies: 21774 SVs from 100 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4451868 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 75,447,242 | 91,057,982 |
| nsv4451868 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 74,667,077 | 90,312,981 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15772300 | copy number loss | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV000847338.2, VCV000686630.2 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15772300 | Remapped | Good | NC_000023.11:g.(?_ 75447242)_(9105798 2_?)del | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 75,447,242 | 91,057,982 |
| nssv15772300 | Submitted genomic | NC_000023.10:g.(?_ 74667077)_(9031298 1_?)del | GRCh37 (hg19) | NC_000023.10 | ChrX | 74,667,077 | 90,312,981 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15772300 | GRCh37: NC_000023.10:g.(?_74667077)_(90312981_?)del | copy number loss | unknown | not provided | Pathogenic | ClinVar | RCV000847338.2, VCV000686630.2 | 1 |