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dbVar

Database of genomic structural variation

nsv4439813

Organism: Homo sapiens

Study:nstd175 (Genome in a Bottle)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:70

Description:SVTYPE=DEL;REPTYPE=CONTRAC
Publication(s):Genome in a Bottle

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 107 SVs from 35 studies. See in: genome view

Remapped(Score: Perfect):7,870,908-7,870,977

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4439813	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000019.10	Chr19	7,870,908	7,870,977
nsv4439813	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000019.9	Chr19	7,935,794	7,935,863

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv15765868	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv15765868	Remapped	Perfect	NC_000019.10:g.787 0908_7870977del	GRCh38.p12	First Pass	NC_000019.10	Chr19	7,870,908	7,870,977
nssv15765868	Submitted genomic		NC_000019.9:g.7935 794_7935863del	GRCh37 (hg19)		NC_000019.9	Chr19	7,935,794	7,935,863

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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