nsv4436161
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:complex substitution
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:61,220,546
- Description:Single allele AND Glioma
- Publication(s):Febbo et al. 2011
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 105723 SVs from 138 studies. See in: genome view
Overlapping variant regions from other studies: 106081 SVs from 138 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4436161 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 23,524,428 | 84,744,973 |
| nsv4436161 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000009.11 | Chr9 | 23,524,426 | 87,359,888 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|---|
| nssv15754782 | complex substitution | Multiple | Multiple | Glioma; Glioma; Glioma; Glioma | Likely pathogenic | ClinVar | RCV000754871.1, VCV000617751.1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv15754782 | Remapped | Good | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 23,524,428 | 84,744,973 |
| nssv15754782 | Submitted genomic | GRCh37 (hg19) | NC_000009.11 | Chr9 | 23,524,426 | 87,359,888 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
|---|---|---|---|---|---|---|
| nssv15754782 | complex substitution | somatic | Glioma; Glioma; Glioma; Glioma | Likely pathogenic | ClinVar | RCV000754871.1, VCV000617751.1 |