nsv4078139
- Organism: Homo sapiens
- Study:nstd166 (gnomAD Structural Variants)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:17,775
- Publication(s):gnomAD_Structural_Variants
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 78 SVs from 10 studies. See in: genome view
Overlapping variant regions from other studies: 79 SVs from 10 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4078139 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 8,746,815 | 8,764,589 |
| nsv4078139 | Submitted genomic | GRCh37.p13 | Primary Assembly | NC_000003.11 | Chr3 | 8,788,501 | 8,806,275 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv15971438 | duplication | Sequencing | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15971438 | Remapped | Perfect | NC_000003.12:g.874 6815_8764589dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 8,746,815 | 8,764,589 |
| nssv15971438 | Submitted genomic | NC_000003.11:g.878 8501_8806275dup | GRCh37.p13 | NC_000003.11 | Chr3 | 8,788,501 | 8,806,275 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv15971438 | 9.2e-005 | 2 | 21694 |