2DAQ,4RXJ


Conserved Protein Domain Family
PWWP_NSD3_rpt2

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cd20166: PWWP_NSD3_rpt2 
Click on image for an interactive view with Cn3D
second PWWP domain found in nuclear SET domain-containing protein 3 (NSD3) and similar proteins
NSD3, also called histone-lysine N-methyltransferase NSD3, protein whistle, WHSC1-like 1 isoform 9 with methyltransferase activity to lysine, or Wolf-Hirschhorn syndrome candidate 1-like protein 1 (WHSC1-like protein 1, or WHSC1L1), is a lysine methyltransferase encoded by gene NSD3, which is amplified in human breast cancer cell lines. Moreover, translocation resulting in NUP98 fusion to NSD3 leads to the development of acute myeloid leukemia. NSD3 contains a catalytic suppressor of variegation, enhancer of zeste and trithorax (SET) domain, two proline-tryptophan-tryptophan-prolin motif (PWWP) domains, five plant-homeodomain (PHD) zinc finger motifs, and an NSD-specific Cys-His rich domain (C5HCH). The SET domain is responsible for histone methyltransferase activity. The PWWP and PHD domains are involved in protein-protein interactions. This model corresponds to the second PWWP domain. The PWWP domain specifically recognizes DNA and histone methylated lysines.
Statistics
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PSSM-Id: 438994
Aligned: 8 rows
Threshold Bit Score: 210.6
Created: 9-Jan-2019
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1:putative methyl-histone binding site [polypeptide binding site]
Evidence:
  • Comment:the aromatic residues form the three-walled methyl-lysine cage that directly participate in histone methylated lysine binding and recognition.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                     #  #                           #                                    
2DAQ_A         10 HYKQIVWVKLGNYRWWPAEICNPRSVPLNIQglKHDLGDFPVFFFGSHDYYWVHqGRVFPYVEGDKsfae--gqtsINKT 87   human
4RXJ_A          8 HYKQIVWVKLGNYRWWPAEICNPRSVPLNIQglKHDLGDFPVFFFGSHDYYWVHqGRVFPYVEGDKsfae--gqtsINKT 85   human
Q9BZ95        959 HYKQIVWVKLGNYRWWPAEICNPRSVPLNIQglKHDLGDFPVFFFGSHDYYWVHqGRVFPYVEGDKsfae--gqtsINKT 1036 human
XP_007909379  966 RYKEIVWVKLGIYRWWPAEICNPKSVPLNIQamKHHIGEFPVRFFGSNDYYWVHqGRVFPYLEGDKgnvsdgrtgsINET 1045 elephant shark
KYO34266      912 HYKQIVWVKLGNYRWWPAEICNPRSVPLNIQglKHDIGDFPVFFFGSHDYYWVHqGRVFPYVEGDKsfae--gqtsINKT 989  American alli...
OCT86470      899 HYKQIVWVKLGNYRWWPAEICNPRSVPFNIQglKHDIGDFPVFFFGSHDYYWVHqGRVFPYVEGDKsfae--gqtsINKT 976  African clawe...
KPP69553      174 HYKQIVWVKLGNYRWWPAEICNPRLVPFNIQtlKHDIGDFPVFFFGSHDYYWTSqGRVFPYVEGDKhfae--gqatINKT 251  Asian bonytongue
XP_014346515 1007 HYKQIVWVKLGNYRWWPAEICSPRSVPHNIQgiKHDIGDFPVFFFGSHDYYWVHrGRVFPYVEGDKsfae--gqisGSKT 1084 coelacanth
Feature 1                          
2DAQ_A         88 FKKALEEAAKRFQELKA 104  human
4RXJ_A         86 FKKALEEAAKRFQELKA 102  human
Q9BZ95       1037 FKKALEEAAKRFQELKA 1053 human
XP_007909379 1046 FKKALEETTKRFRELKA 1062 elephant shark
KYO34266      990 FKKALEEAAKRFQELKA 1006 American alligator
OCT86470      977 FKKALEEAARRFQELKA 993  African clawed frog
KPP69553      252 FKKALEEAARRFQELKA 268  Asian bonytongue
XP_014346515 1085 FKKALDEAAKRFQELKA 1101 coelacanth

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