1EGA


Conserved Protein Domain Family
Era

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COG1159: Era (this model, PSSM-Id:224081 is obsolete and has been replaced by 440773)
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GTPase Era, involved in 16S rRNA processing [Translation, ribosomal structure and biogenesis]
linked to 3D-structure
Statistics
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PSSM-Id: 224081
Aligned: 48 rows
Threshold Bit Score: 279.076
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1EGA_B     3 IDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEG-----AYQAIYVDTPGLHMEeKRAINRL 77  Escherichia coli
3334175    1 ---MKSGFAAILGRPSTGKSTLLNSICGHKISIISPIPQTTRNNIKGIFTDD-----RGQIIFIDTPGFHLS-KKKFNIA 71  Lyme disease spiroc...
11386764   3 IKKKYCGHVIIVGKANVGKSTLLNNIIGKKISIVSRKKNTTQSNITGIKTED-----NYQSIYIDTPGVVFDkNNNQMKH 77  Buchnera aphidicola...
13959362   1 ---MKSGFVSIIGRTNAGKSTLINSLLEEKIALVSHKQNATRRKIKAIVMHe-----KNQIIFIDTPGLHES-GATLNQL 71  Campylobacter jejuni
15645144   1 MMKTKAGFVALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKdkewyESQIIFLDTPGLHHQ-EKLLNQC 79  Helicobacter pylori...
1352385    1 ---MKVLKVGVLGPTNAGKSTLINFLHNDDSLMVSSMNNTTLLSISTEVINQa----NKNIVFIDVPGFTEK-KHSNYEL 72  Mycoplasma genitalium
21263604   1 ---MKILFSTIIGRPNVGKSTLLNNILEYDLAIVSSKPQATRDQIMGIYSDD-----DYQLIFTDTPGIYKT-KTKFGEN 71  Mycoplasma pulmonis
6225298    3 nqiQKTISVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIVTLK-----DTQIILYDTPGIFEP-KGMLEKA 76  Rickettsia prowazekii
13358054   4 EMIKKYGIVAIVGKPNVGKSTLINAIMKKKVSIISNKPQTTRNAVKEIYEDD-----ESAIIFTDTPGFHEP-SNKLDLF 77  Ureaplasma urealyticum
10719990   1 -MKTKAGFVALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKdkegyESQIIFLDTPGLHHQ-EKLLNQC 78  Helicobacter pylori...
1EGA_B    78 MNKAASSSIGDVELVIFVVEGTR-WTP-DDEMVLNKLREG-KAPVILAVNKVDNVQEKADL-LPHLQFLASQMNFL--DI 151 Escherichia coli
3334175   72 MMKNIHSSIGEVELILYIIDIQDkPGE-EENKMLEIIKNS-KIKFLVILNKIDLKNTKIK---EITQFLKEKGIEDs-NI 145 Lyme disease spiroc...
11386764  78 HKNNFYQTTQIATLIIFIIDRID-WTI-HDEIILNEIKKT-KIPILIIINKIDKISNKI-IlLPFINFLKKKIDFI--EI 151 Buchnera aphidicola...
13959362  72 LVQSAIKSMGDCDVILFVASVFDsTKD-YENFLSLNP----QVPHIITLNKVDLTDNATLL-KKLSEYAKFSQHFK--AI 143 Campylobacter jejuni
15645144  80 MLSQALKAMGDAELCVFLASVHDdLKG-YEEFLSLC-----QKPHILALSKIDTATHKQVL-QKLQEYQQYDSQFL--AL 150 Helicobacter pylori...
1352385   73 ITKEIRKALSGIDVLLLVVRSDQnNKIeFLKTQLQQLKR---YQNLTRIFLINKFHQKS---LSEVNKAIILEEFKpqKT 146 Mycoplasma genitalium
21263604  72 LNAQSYESLKDIDLVIFLSPANEeIGP-GDEFICEKIKN--FTNKIALITKIDLENSEEv--LKKKAEKLKSLGFK--EI 144 Mycoplasma pulmonis
6225298   77 MVRCAWSSVYSADLVLSIIDSLKpLDN-IAHNILNQFCLL-NIVPIFLLNKID-IESKY-L-NDIKAFLKITHPKS--LL 149 Rickettsia prowazekii
13358054  78 LNHEIEISYKEANVILFVTTMDKeLDA-NDFEIINLIKEanKENIILVISKAEMAKNQD-QiDERIHFLKKHIAFK--DV 153 Ureaplasma urealyticum
10719990  79 MLSQALKAMGDAELRVFLASVHDdLKG-YEEFLSLC-----QKPHILALSKIDTATHKQVL-QKLQEYQKYSSQFL--AL 149 Helicobacter pylori...
1EGA_B   152 VPISAETGLNVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSN---ERGG 228 Escherichia coli
3334175  146 IKISAEKKINTEELKNKIYENFSEGPLYYPQEYYTDQEINFRISEIIREKAIENLKEELPYSLYVDIDTLEN----KKGS 221 Lyme disease spiroc...
11386764 152 LPISAKKISNLILLKNIIKSYLPENCHIYPECYITTNSDFFTVSEIIREQLILFLGDELPSIIKVEIESFKKK---EKIA 228 Buchnera aphidicola...
13959362 144 IPYSSKKKSYKKGLLDEIVKYLDEHEYFYDPEFLSASSEKEIYRDFILESIYENLSDELPYSSEVLIHRTKD----TPNL 219 Campylobacter jejuni
15645144 151 VPLSAKKSQNLNALLECISQHLSPSAWLFEKDLMSDEKMRDIYKEIIRESLFDFLSDEIPYESDVMIDKFIE----EERI 226 Helicobacter pylori...
1352385  147 IEINLLKFDKNLFWSIFKQVELRYNIFRKDINFIDANNDDFKILEGLREQIIFYCKNEIPHIARIEIIEKSFNk--EKNL 224 Mycoplasma genitalium
21263604 145 FAISSKDHGSIKKLINEIKKYSYEGERQFDEDMITEKSEKFIAKESIREACIDLLEQELPHSILVEIDSFSEEereEKNL 224 Mycoplasma pulmonis
6225298  150 FPISALLGKNVDVLLEYIKSKAKVSPWLYADDDITNLPMRFIAAEITREQLFLNLQQELPYKLTVQTEKFEEL---KDKS 226 Rickettsia prowazekii
13358054 154 VQISALHVINIDKLINTIKNYLHKDVVTDYFRQKAEKEDKFVITEIIREQCLLNLNHEVPHGVGVEIDESKYNq--EANH 231 Ureaplasma urealyticum
10719990 150 VPLSAKKSQNLNALLECISKHLSPSAWLFEKDLMSDEKMRDIYKEIIRESLFDFLSDEIPYESDVMIDKFIE----EERI 225 Helicobacter pylori...
1EGA_B   229 YDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADD-ERALRSLGYVDD 300 Escherichia coli
3334175  222 LFIRANIFVANESQKGIIVGKNGKEIKSIGERARKTIAKIFETKCNLFLQVKLKKNWNKE-DKLIKRLIN--- 290 Lyme disease spirochete
11386764 229 LYIKAIIWVKNVRQKSIVIGHNGEKIKKISMISRNNIEKKFYIKTHLVLWVKDKN------------------ 283 Buchnera aphidicola (Acyrt...
13959362 220 LILEANIITDTNSHKGMLIGKEGATLKRIGKDARFKISKLAQKKVLLKLFVTVKKNWQKD-EEFLKKL--LND 289 Campylobacter jejuni
15645144 227 DKVYARIIVEKESQKKIVIGKNGVNIKRIGTNARLKMQEVGEKKVFLNLQVIAQKSWSKE-EKSLQKLGYIHR 298 Helicobacter pylori 26695
1352385  225 LKIHLVISVPKLSQKKIIIGKNAEMIKAIGIATRKKLLNHFDCDIFIDIFVKTE--KQKLpVYSFLSK----- 290 Mycoplasma genitalium
21263604 225 VEIHSTIYVNKESQKGILIGKGGSKIKKIGISARKKIQRKLGVNVKLFLKIKVKKNWVNQ-EKIFKKFDN--- 293 Mycoplasma pulmonis
6225298  227 IKINQVIVISRENYKAIILGKNGAKIKDIGVKSRVQLEQFFCVPVHLFLFVKVHAFWENN-QEFYQYMKI--- 295 Rickettsia prowazekii
13358054 232 WIIKASIIIEKNSHKPIIIGQNGTMIKKISMGARKQLHEIYDCHISLTIFVKVENNWRDN-NNIIKSLGYKIK 303 Ureaplasma urealyticum
10719990 226 DKVYARIIVEKESQKKIVIGKNGVNIKRIGTNARLKMQEVGEKKVFLNLQVIAQKSWSKE-EKSLQKLGYIYQ 297 Helicobacter pylori J99
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